We don't search for proteins, We design them

Our full-stack platform runs from metagenome to validated editor: a richly connected DNA and protein database, function-aware generative models, and an in-house wet lab that closes the loop

Nature shows us what worked
We design what should

Function built into the design

Rather than random generation, we encode each application's biological and biophysical requirements directly into our models, then validate function through purpose-built assays, and every result feeds the next design round, already producing double-digit experimental hit rates

Design briefCell typeDelivery routeEdit precisionCompact sizeDesign enginecandidatesscanrefinelearnDe novo editor

Nature optimized proteins for survival, We optimize them for purpose

That is a fundamentally harder problem, and the one we built Mandrake to solve

Designed to move from possibility to function

Agriculture

Editors built for elite plant tissue

Crop context and delivery shape the design from the beginning, rather than being imposed on a finished editor

Therapeutics

Compact editors built around delivery

Size, targeting and cell context become inputs to the design brief, not filters applied at the end

Discovery

New systems from biological dark matter

TerraBase makes rare architectures searchable so promising systems can move into design and assay

Research

Visit The Assay
RBX1 protein binder structure produced by Mandrake ORBITORBIT · RBX1
Competition result · GEM × Adaptyv

The only RBX1 design rated Strong

In the GEM × Adaptyv RBX1 competition, Mandrake’s ORBIT produced the only submission Adaptyv classified as Strong

Read the result
Protein structure illustration
Research

Protein Language Models: Fluent, but clueless

Four experiments on what protein language models learn, where they fail and why structure and physics still matter

Read the research

Let's make life programmable

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